HL_7ASO_042
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UUUUGUAGAA
- Length
- 10 nucleotides
- Bulged bases
- 7ASO|1|Y|A|617
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASO_042 not in the Motif Atlas
- Homologous match to HL_4WF9_018
- Geometric discrepancy: 0.1363
- The information below is about HL_4WF9_018
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
7ASO|1|Y|U|609
7ASO|1|Y|U|610
7ASO|1|Y|U|611
7ASO|1|Y|U|612
7ASO|1|Y|G|613
7ASO|1|Y|U|614
7ASO|1|Y|A|615
7ASO|1|Y|G|616
7ASO|1|Y|A|617
7ASO|1|Y|A|618
Current chains
- Chain Y
- 23S
Nearby chains
- Chain O
- 50S ribosomal protein L15
- Chain U
- 50S ribosomal protein L21
- Chain e
- 50S ribosomal protein L3
- Chain g
- 50S ribosomalprotein L32p
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