HL_7ASO_047
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CGUUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 7ASO|1|Y|U|792, 7ASO|1|Y|A|796, 7ASO|1|Y|A|797
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASO_047 not in the Motif Atlas
- Homologous match to HL_7A0S_022
- Geometric discrepancy: 0.1401
- The information below is about HL_7A0S_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
7ASO|1|Y|C|789
7ASO|1|Y|G|790
7ASO|1|Y|U|791
7ASO|1|Y|U|792
7ASO|1|Y|G|793
7ASO|1|Y|A|794
7ASO|1|Y|A|795
7ASO|1|Y|A|796
7ASO|1|Y|A|797
7ASO|1|Y|G|798
Current chains
- Chain Y
- 23S
Nearby chains
- Chain V
- 50S ribosomal protein L22
- Chain e
- 50S ribosomal protein L3
- Chain g
- 50S ribosomalprotein L32p
- Chain i
- 50S ribosomal protein L34
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