HL_7ASO_075

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

7ASO|1|Y|A|2295, 7ASO|1|Y|C|2302

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_075 not in the Motif Atlas

Homologous match to HL_5J7L_187

Geometric discrepancy: 0.1147

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7ASO|1|Y|C|2291
7ASO|1|Y|U|2292
7ASO|1|Y|A|2293
7ASO|1|Y|A|2294
7ASO|1|Y|A|2295
7ASO|1|Y|A|2296
7ASO|1|Y|G|2297
7ASO|1|Y|G|2298
7ASO|1|Y|U|2299
7ASO|1|Y|A|2300
7ASO|1|Y|A|2301
7ASO|1|Y|C|2302
7ASO|1|Y|G|2303

Current chains

Chain Y

23S

Nearby chains

Chain P

50S ribosomal protein L16

Chain b

50S ribosomal protein L27