HL_7ASO_087
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 7ASO|1|Y|G|2778, 7ASO|1|Y|C|2782
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASO_087 not in the Motif Atlas
- Geometric match to HL_9AXU_063
- Geometric discrepancy: 0.3995
- The information below is about HL_9AXU_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.1
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
7ASO|1|Y|C|2772
7ASO|1|Y|U|2773
7ASO|1|Y|G|2774
7ASO|1|Y|A|2775
7ASO|1|Y|A|2776
7ASO|1|Y|A|2777
7ASO|1|Y|G|2778
7ASO|1|Y|C|2779
7ASO|1|Y|A|2780
7ASO|1|Y|U|2781
7ASO|1|Y|C|2782
7ASO|1|Y|U|2783
7ASO|1|Y|A|2784
7ASO|1|Y|A|2785
7ASO|1|Y|G|2786
Current chains
- Chain Y
- 23S
Nearby chains
- Chain L
- 50S ribosomal protein L6
- Chain M
- 50S ribosomal protein L13
- Chain k
- 50S ribosomal protein L36
Coloring options: