HL_7ASO_105
3D structure
- PDB id
- 7ASO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 30 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UGAUAAGG
- Length
- 8 nucleotides
- Bulged bases
- 7ASO|1|Y|U|1002, 7ASO|1|Y|G|1005
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASO_105 not in the Motif Atlas
- Homologous match to HL_4WF9_027
- Geometric discrepancy: 0.1342
- The information below is about HL_4WF9_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
7ASO|1|Y|U|999
7ASO|1|Y|G|1000
7ASO|1|Y|A|1001
7ASO|1|Y|U|1002
7ASO|1|Y|A|1003
7ASO|1|Y|A|1004
7ASO|1|Y|G|1005
7ASO|1|Y|G|1006
Current chains
- Chain Y
- 23S
Nearby chains
- Chain C
- 5S ribosomal RNA; 5S rRNA
- Chain P
- 50S ribosomal protein L16
Coloring options: