HL_7ASO_106

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

ACUGGGGCGGU

Length

11 nucleotides

Bulged bases

7ASO|1|Y|G|2277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_106 not in the Motif Atlas

Geometric match to HL_7KGA_001

Geometric discrepancy: 0.3606

The information below is about HL_7KGA_001

Detailed Annotation

Anticodon loop related

Broad Annotation

Anticodon loop related

Motif group

HL_06059.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

51

Unit IDs

7ASO|1|Y|A|2274
7ASO|1|Y|C|2275
7ASO|1|Y|U|2276
7ASO|1|Y|G|2277
7ASO|1|Y|G|2278
7ASO|1|Y|G|2279
7ASO|1|Y|G|2280
7ASO|1|Y|C|2281
7ASO|1|Y|G|2282
7ASO|1|Y|G|2283
7ASO|1|Y|U|2284

Current chains

Chain Y

23S

Nearby chains

Chain P

50S ribosomal protein L16

Chain b

50S ribosomal protein L27