HL_7ASO_111

3D structure

PDB id

7ASO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Staphylococcus aureus 70S after 30 minutes incubation at 37C

Experimental method

ELECTRON MICROSCOPY

Resolution

3.11 Å

Loop

Sequence

AGUUAUGU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7ASO_111 not in the Motif Atlas

Homologous match to HL_4WF9_004

Geometric discrepancy: 0.4874

The information below is about HL_4WF9_004

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

12

Unit IDs

7ASO|1|Y|A|136
7ASO|1|Y|G|137
7ASO|1|Y|U|138
7ASO|1|Y|U|139
7ASO|1|Y|A|140
7ASO|1|Y|U|141
7ASO|1|Y|G|142
7ASO|1|Y|U|143

Current chains

Chain Y

23S

Nearby chains

Chain W

50S ribosomal protein L23