HL_7ASP_047
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- GGACGAGGCCGAAUUC
- Length
- 16 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_047 not in the Motif Atlas
- Geometric match to HL_8C3A_015
- Geometric discrepancy: 0.3681
- The information below is about HL_8C3A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53971.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7ASP|1|Y|G|918
7ASP|1|Y|G|919
7ASP|1|Y|A|920
7ASP|1|Y|C|921
7ASP|1|Y|G|922
7ASP|1|Y|A|923
7ASP|1|Y|G|924
7ASP|1|Y|G|925
7ASP|1|Y|C|942
7ASP|1|Y|C|943
7ASP|1|Y|G|944
7ASP|1|Y|A|945
7ASP|1|Y|A|946
7ASP|1|Y|U|947
7ASP|1|Y|U|948
7ASP|1|Y|C|949
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L16
- Chain d
- 30S ribosomal protein S13
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