HL_7ASP_064
3D structure
- PDB id
- 7ASP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus 70S after 50 minutes incubation at 37C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.86 Å
Loop
- Sequence
- UUUAUCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7ASP|1|Y|A|1807, 7ASP|1|Y|U|1808, 7ASP|1|Y|C|1809, 7ASP|1|Y|A|1813
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7ASP_064 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1326
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7ASP|1|Y|U|1804
7ASP|1|Y|U|1805
7ASP|1|Y|U|1806
7ASP|1|Y|A|1807
7ASP|1|Y|U|1808
7ASP|1|Y|C|1809
7ASP|1|Y|A|1810
7ASP|1|Y|A|1811
7ASP|1|Y|A|1812
7ASP|1|Y|A|1813
7ASP|1|Y|A|1814
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain B
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
Coloring options: