HL_7AZO_037

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

7AZO|1|16SB|U|854

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_037 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.4471

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

7AZO|1|16SB|G|852
7AZO|1|16SB|C|853
7AZO|1|16SB|U|854
7AZO|1|16SB|U|855
7AZO|1|16SB|U|856
7AZO|1|16SB|G|857
7AZO|1|16SB|C|858

Current chains

Chain 16SB

16S rRNA

Nearby chains