3D structure

PDB id
7AZO (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
Experimental method
X-RAY DIFFRACTION
Resolution
3.3 Å

Loop

Sequence
CUACGG
Length
6 nucleotides
Bulged bases
7AZO|1|16SB|A|985
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7AZO_041 not in the Motif Atlas
Homologous match to HL_4LFB_009
Geometric discrepancy: 0.2142
The information below is about HL_4LFB_009
Detailed Annotation
UNCG
Broad Annotation
No text annotation
Motif group
HL_61337.1
Basepair signature
cWW-tSW-F
Number of instances in this motif group
49

Unit IDs

7AZO|1|16SB|C|983
7AZO|1|16SB|U|984
7AZO|1|16SB|A|985
7AZO|1|16SB|C|986
7AZO|1|16SB|G|987
7AZO|1|16SB|G|988

Current chains

Chain 16SB
16S rRNA

Nearby chains

Chain L14B
50S ribosomal protein L14
Chain L19B
50S ribosomal protein L19

Coloring options:


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