HL_7AZO_041

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7AZO|1|16SB|A|985

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_041 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.2142

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

7AZO|1|16SB|C|983
7AZO|1|16SB|U|984
7AZO|1|16SB|A|985
7AZO|1|16SB|C|986
7AZO|1|16SB|G|987
7AZO|1|16SB|G|988

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain L14B

50S ribosomal protein L14

Chain L19B

50S ribosomal protein L19