HL_7AZO_053
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GAA(M2G)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 7AZO|1|16SB|A|1591, 7AZO|1|16SB|G|1594
- QA status
- Modified nucleotides: M2G, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_053 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1272
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7AZO|1|16SB|G|1586
7AZO|1|16SB|A|1587
7AZO|1|16SB|A|1588
7AZO|1|16SB|M2G|1589
7AZO|1|16SB|5MC|1590
7AZO|1|16SB|A|1591
7AZO|1|16SB|A|1592
7AZO|1|16SB|C|1593
7AZO|1|16SB|G|1594
7AZO|1|16SB|C|1595
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain ASIB
- Transfer RNA; tRNA
- Chain PSIB
- Transfer RNA; tRNA
- Chain S10B
- 30S ribosomal protein S10
- Chain S13B
- 30S ribosomal protein S13
- Chain S9B
- 30S ribosomal protein S9
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