HL_7AZO_056

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_056 not in the Motif Atlas

Homologous match to HL_5J7L_023

Geometric discrepancy: 0.0971

The information below is about HL_5J7L_023

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7AZO|1|16SB|C|1704
7AZO|1|16SB|G|1705
7AZO|1|16SB|U|1706
7AZO|1|16SB|G|1707
7AZO|1|16SB|A|1708
7AZO|1|16SB|G|1709

Current chains

Chain 16SB

16S rRNA

Nearby chains

Chain S2B

30S ribosomal protein S2

Chain S5B

30S ribosomal protein S5

Chain S8B

30S ribosomal protein S8