HL_7AZO_081

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_081 not in the Motif Atlas

Geometric match to HL_3V7E_003

Geometric discrepancy: 0.2021

The information below is about HL_3V7E_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7AZO|1|23SA|C|570
7AZO|1|23SA|G|571
7AZO|1|23SA|C|572
7AZO|1|23SA|A|573
7AZO|1|23SA|A|574
7AZO|1|23SA|G|575

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L13A

50S ribosomal protein L13

Chain L21A

50S ribosomal protein L21