HL_7AZO_107

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CAAGAG

Length

6 nucleotides

Bulged bases

7AZO|1|23SA|A|1684

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_107 not in the Motif Atlas

Geometric match to HL_7RQB_041

Geometric discrepancy: 0.0996

The information below is about HL_7RQB_041

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_01057.2

Basepair signature

cWW

Number of instances in this motif group

5

Unit IDs

7AZO|1|23SA|C|1680
7AZO|1|23SA|A|1681
7AZO|1|23SA|A|1682
7AZO|1|23SA|G|1683
7AZO|1|23SA|A|1684
7AZO|1|23SA|G|1685

Current chains

Chain 23SA

23S rRNA

Nearby chains