HL_7AZO_109

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_109 not in the Motif Atlas

Geometric match to HL_7RQB_043

Geometric discrepancy: 0.2139

The information below is about HL_7RQB_043

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43656.2

Basepair signature

cWW-tSH

Number of instances in this motif group

8

Unit IDs

7AZO|1|23SA|U|1768
7AZO|1|23SA|G|1769
7AZO|1|23SA|A|1770
7AZO|1|23SA|U|1771
7AZO|1|23SA|G|1772
7AZO|1|23SA|A|1773
7AZO|1|23SA|G|1774

Current chains

Chain 23SA

23S rRNA

Nearby chains