HL_7AZO_157
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_157 not in the Motif Atlas
- Geometric match to HL_7RQB_022
- Geometric discrepancy: 0.0865
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7AZO|1|23SB|G|761
7AZO|1|23SB|G|762
7AZO|1|23SB|U|763
7AZO|1|23SB|G|764
7AZO|1|23SB|A|765
7AZO|1|23SB|G|766
7AZO|1|23SB|A|767
7AZO|1|23SB|C|768
Current chains
- Chain 23SB
- 23S rRNA
Nearby chains
- Chain 16SB
- Small subunit ribosomal RNA; SSU rRNA
- Chain L2B
- 50S ribosomal protein L2
- Chain S15B
- 30S ribosomal protein S15
- Chain S17B
- 30S ribosomal protein S17
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