HL_7AZO_195

3D structure

PDB id

7AZO (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

7AZO|1|23SB|G|2544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZO_195 not in the Motif Atlas

Geometric match to HL_7RQB_061

Geometric discrepancy: 0.0798

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

7AZO|1|23SB|U|2543
7AZO|1|23SB|G|2544
7AZO|1|23SB|A|2545
7AZO|1|23SB|A|2546
7AZO|1|23SB|G|2547
7AZO|1|23SB|A|2548
7AZO|1|23SB|A|2549
7AZO|1|23SB|G|2550

Current chains

Chain 23SB

23S rRNA

Nearby chains

Chain L6B

50S ribosomal protein L6