HL_7AZO_243
3D structure
- PDB id
- 7AZO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGGUUCGAUUCCG
- Length
- 13 nucleotides
- Bulged bases
- 7AZO|1|ESIA|U|55, 7AZO|1|ESIA|C|62
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZO_243 not in the Motif Atlas
- Homologous match to HL_5EL4_250
- Geometric discrepancy: 0.41
- The information below is about HL_5EL4_250
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25222.2
- Basepair signature
- cWW-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7AZO|1|ESIA|U|51
7AZO|1|ESIA|G|52
7AZO|1|ESIA|G|53
7AZO|1|ESIA|U|54
7AZO|1|ESIA|U|55
7AZO|1|ESIA|C|56
7AZO|1|ESIA|G|57
7AZO|1|ESIA|A|58
7AZO|1|ESIA|U|59
7AZO|1|ESIA|U|60
7AZO|1|ESIA|C|61
7AZO|1|ESIA|C|62
7AZO|1|ESIA|G|63
Current chains
- Chain ESIA
- Phe-tRNA
Nearby chains
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: