HL_7AZS_017
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7AZS|1|16SA|U|1422
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_017 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.1133
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7AZS|1|16SA|G|1415
7AZS|1|16SA|A|1416
7AZS|1|16SA|U|1417
7AZS|1|16SA|U|1418
7AZS|1|16SA|A|1419
7AZS|1|16SA|G|1420
7AZS|1|16SA|A|1421
7AZS|1|16SA|U|1422
7AZS|1|16SA|A|1423
7AZS|1|16SA|C|1424
7AZS|1|16SA|C|1425
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain 23SA
- Large subunit ribosomal RNA; LSU rRNA
- Chain ESIA
- Transfer RNA; tRNA
- Chain MRNA
- mRNA
- Chain PSIA
- Transfer RNA; tRNA
- Chain S11A
- 30S ribosomal protein S11
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