HL_7AZS_021
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GAA(M2G)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 7AZS|1|16SA|A|1591, 7AZS|1|16SA|G|1594
- QA status
- Modified nucleotides: M2G, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_021 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1116
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7AZS|1|16SA|G|1586
7AZS|1|16SA|A|1587
7AZS|1|16SA|A|1588
7AZS|1|16SA|M2G|1589
7AZS|1|16SA|5MC|1590
7AZS|1|16SA|A|1591
7AZS|1|16SA|A|1592
7AZS|1|16SA|C|1593
7AZS|1|16SA|G|1594
7AZS|1|16SA|C|1595
Current chains
- Chain 16SA
- 16S rRNA
Nearby chains
- Chain ASIA
- Transfer RNA; tRNA
- Chain PSIA
- Transfer RNA; tRNA
- Chain S10A
- 30S ribosomal protein S10
- Chain S13A
- 30S ribosomal protein S13
- Chain S14A
- 30S ribosomal protein S14 type Z
- Chain S9A
- 30S ribosomal protein S9
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