HL_7AZS_047
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_047 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.175
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7AZS|1|16SB|C|1318
7AZS|1|16SB|G|1319
7AZS|1|16SB|G|1320
7AZS|1|16SB|U|1321
7AZS|1|16SB|G|1322
7AZS|1|16SB|A|1323
7AZS|1|16SB|A|1324
7AZS|1|16SB|A|1325
7AZS|1|16SB|U|1326
7AZS|1|16SB|G|1327
Current chains
- Chain 16SB
- 16S rRNA
Nearby chains
- Chain 23SB
- Large subunit ribosomal RNA; LSU rRNA
- Chain ESIB
- Transfer RNA; tRNA
- Chain MRNB
- mRNA
- Chain S11B
- 30S ribosomal protein S11
- Chain S7B
- 30S ribosomal protein S7
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