HL_7AZS_132
3D structure
- PDB id
- 7AZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 7AZS|1|23SA|G|2767, 7AZS|1|23SA|C|2771
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7AZS_132 not in the Motif Atlas
- Geometric match to HL_7RQB_066
- Geometric discrepancy: 0.0778
- The information below is about HL_7RQB_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_56677.7
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 8
Unit IDs
7AZS|1|23SA|C|2761
7AZS|1|23SA|U|2762
7AZS|1|23SA|G|2763
7AZS|1|23SA|A|2764
7AZS|1|23SA|A|2765
7AZS|1|23SA|A|2766
7AZS|1|23SA|G|2767
7AZS|1|23SA|C|2768
7AZS|1|23SA|A|2769
7AZS|1|23SA|U|2770
7AZS|1|23SA|C|2771
7AZS|1|23SA|U|2772
7AZS|1|23SA|A|2773
7AZS|1|23SA|A|2774
7AZS|1|23SA|G|2775
Current chains
- Chain 23SA
- 23S rRNA
Nearby chains
- Chain L13A
- 50S ribosomal protein L13
- Chain L6A
- 50S ribosomal protein L6
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