HL_7AZY_024

3D structure

PDB id

7AZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Context-specific inhibition of eukaryotic translation by macrolide antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

2.877 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

7AZY|1|E|U|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7AZY_024 not in the Motif Atlas

Geometric match to HL_5TBW_024

Geometric discrepancy: 0.1688

The information below is about HL_5TBW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.2

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7AZY|1|E|C|1076
7AZY|1|E|U|1077
7AZY|1|E|U|1078
7AZY|1|E|A|1079
7AZY|1|E|A|1080
7AZY|1|E|U|1081
7AZY|1|E|U|1082
7AZY|1|E|G|1083

Current chains

Chain E

25S ribosomal RNA

Nearby chains

Chain W

60S ribosomal protein L29

Chain t

60S ribosomal protein L5

Chain u

60S ribosomal protein L21-A