HL_7B7D_020
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UAUUUUGUUGGUUUCUA
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_020 not in the Motif Atlas
- Homologous match to HL_4V88_205
- Geometric discrepancy: 0.5054
- The information below is about HL_4V88_205
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_88364.1
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7B7D|1|2|U|828
7B7D|1|2|A|829
7B7D|1|2|U|830
7B7D|1|2|U|831
7B7D|1|2|U|832
7B7D|1|2|U|833
7B7D|1|2|G|834
7B7D|1|2|U|835
7B7D|1|2|U|836
7B7D|1|2|G|837
7B7D|1|2|G|838
7B7D|1|2|U|839
7B7D|1|2|U|840
7B7D|1|2|U|841
7B7D|1|2|C|842
7B7D|1|2|U|843
7B7D|1|2|A|844
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain T
- 40S ribosomal protein S6-A
- Chain X
- 40S ribosomal protein S11-A
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