HL_7B7D_045
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 7B7D|1|LA|G|283, 7B7D|1|LA|A|284, 7B7D|1|LA|A|285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_045 not in the Motif Atlas
- Homologous match to HL_5TBW_008
- Geometric discrepancy: 0.0817
- The information below is about HL_5TBW_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77436.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 23
Unit IDs
7B7D|1|LA|U|278
7B7D|1|LA|U|279
7B7D|1|LA|U|280
7B7D|1|LA|G|281
7B7D|1|LA|G|282
7B7D|1|LA|G|283
7B7D|1|LA|A|284
7B7D|1|LA|A|285
7B7D|1|LA|U|286
7B7D|1|LA|G|287
Current chains
- Chain LA
- 25S rRNA
Nearby chains
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain LW
- 60S ribosomal protein L28
- Chain Lk
- 60S ribosomal protein L42-A
- Chain Lm
- 60S ribosomal protein L18-A
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