HL_7B7D_113
3D structure
- PDB id
- 7B7D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAUUGCAGAAUUCCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 7B7D|1|LC|A|80, 7B7D|1|LC|C|84, 7B7D|1|LC|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7B7D_113 not in the Motif Atlas
- Homologous match to HL_8P4V_073
- Geometric discrepancy: 0.2297
- The information below is about HL_8P4V_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08513.2
- Basepair signature
- cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7B7D|1|LC|U|69
7B7D|1|LC|G|70
7B7D|1|LC|A|71
7B7D|1|LC|A|72
7B7D|1|LC|U|73
7B7D|1|LC|U|74
7B7D|1|LC|G|75
7B7D|1|LC|C|76
7B7D|1|LC|A|77
7B7D|1|LC|G|78
7B7D|1|LC|A|79
7B7D|1|LC|A|80
7B7D|1|LC|U|81
7B7D|1|LC|U|82
7B7D|1|LC|C|83
7B7D|1|LC|C|84
7B7D|1|LC|G|85
7B7D|1|LC|U|86
7B7D|1|LC|G|87
7B7D|1|LC|A|88
7B7D|1|LC|A|89
Current chains
- Chain LC
- 5.8S rRNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain LU
- 60S ribosomal protein L26-A
- Chain Ld
- 60S ribosomal protein L35-A
- Chain Lh
- 60S ribosomal protein L39
Coloring options: