HL_7BL2_012

3D structure

PDB id

7BL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

pre-50S-ObgE particle state 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

7BL2|1|A|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL2_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.2428

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7BL2|1|A|A|382
7BL2|1|A|C|383
7BL2|1|A|A|384
7BL2|1|A|C|385
7BL2|1|A|G|386
7BL2|1|A|U|387
7BL2|1|A|G|388
7BL2|1|A|G|389
7BL2|1|A|U|390
7BL2|1|A|A|391
7BL2|1|A|U|392

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

50S ribosomal protein L28