HL_7BL6_026
3D structure
- PDB id
- 7BL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 50S-ObgE-GMPPNP particle
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUGCUAACGU
- Length
- 10 nucleotides
- Bulged bases
- 7BL6|1|A|U|958, 7BL6|1|A|C|961
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7BL6_026 not in the Motif Atlas
- Geometric match to HL_5UD5_002
- Geometric discrepancy: 0.2653
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_87306.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7BL6|1|A|G|954
7BL6|1|A|U|955
7BL6|1|A|G|956
7BL6|1|A|C|957
7BL6|1|A|U|958
7BL6|1|A|A|959
7BL6|1|A|A|960
7BL6|1|A|C|961
7BL6|1|A|G|962
7BL6|1|A|U|963
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
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