HL_7BL6_030

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

7BL6|1|A|U|1173, 7BL6|1|A|U|1174, 7BL6|1|A|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL6_030 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3617

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7BL6|1|A|C|1172
7BL6|1|A|U|1173
7BL6|1|A|U|1174
7BL6|1|A|A|1175
7BL6|1|A|U|1176
7BL6|1|A|G|1177

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain L

50S ribosomal protein L15