HL_7BL6_040

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

7BL6|1|A|A|1616, 7BL6|1|A|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL6_040 not in the Motif Atlas

Homologous match to HL_7A0S_040

Geometric discrepancy: 0.108

The information below is about HL_7A0S_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89567.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7BL6|1|A|C|1612
7BL6|1|A|G|1613
7BL6|1|A|A|1614
7BL6|1|A|C|1615
7BL6|1|A|A|1616
7BL6|1|A|C|1617
7BL6|1|A|A|1618
7BL6|1|A|G|1619

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain S

50S ribosomal protein L22