HL_7BL6_048

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

7BL6|1|A|A|1913, 7BL6|1|A|C|1914

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL6_048 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.3005

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7BL6|1|A|G|1910
7BL6|1|A|U|1911
7BL6|1|A|A|1912
7BL6|1|A|A|1913
7BL6|1|A|C|1914
7BL6|1|A|U|1915
7BL6|1|A|A|1916
7BL6|1|A|U|1917
7BL6|1|A|A|1918
7BL6|1|A|A|1919
7BL6|1|A|C|1920

Current chains

Chain A

23S ribosomal RNA

Nearby chains