HL_7BL6_073

3D structure

PDB id

7BL6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S-ObgE-GMPPNP particle

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUUUCGAC

Length

8 nucleotides

Bulged bases

7BL6|1|A|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BL6_073 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.1848

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7BL6|1|A|G|136
7BL6|1|A|U|137
7BL6|1|A|U|138
7BL6|1|A|U|139
7BL6|1|A|C|140
7BL6|1|A|G|141
7BL6|1|A|A|142
7BL6|1|A|C|143

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23