HL_7BOE_017

3D structure

PDB id

7BOE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAUUAGAUACC

Length

11 nucleotides

Bulged bases

7BOE|1|A|U|793

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7BOE_017 not in the Motif Atlas

Homologous match to HL_5J7L_017

Geometric discrepancy: 0.0822

The information below is about HL_5J7L_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7BOE|1|A|G|786
7BOE|1|A|A|787
7BOE|1|A|U|788
7BOE|1|A|U|789
7BOE|1|A|A|790
7BOE|1|A|G|791
7BOE|1|A|A|792
7BOE|1|A|U|793
7BOE|1|A|A|794
7BOE|1|A|C|795
7BOE|1|A|C|796

Current chains

Chain A

16S rRNA

Nearby chains

Chain K

30S ribosomal protein S11

Chain U

30S ribosomal protein S21