HL_7CHD_008

3D structure

PDB id

7CHD (explore in PDB, NAKB, or RNA 3D Hub)

Description

AtaT complexed with acetyl-methionyl-tRNAfMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.804 Å

Loop

Sequence

G(OMC)UCAUAAC

Length

9 nucleotides

Bulged bases

7CHD|1|I|U|33||||2_565

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7CHD_008 not in the Motif Atlas

Geometric match to HL_5L4O_002

Geometric discrepancy: 0.195

The information below is about HL_5L4O_002

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_82182.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

19

Unit IDs

7CHD|1|I|G|31||||2_565
7CHD|1|I|OMC|32||||2_565
7CHD|1|I|U|33||||2_565
7CHD|1|I|C|34||||2_565
7CHD|1|I|A|35||||2_565
7CHD|1|I|U|36||||2_565
7CHD|1|I|A|37||||2_565
7CHD|1|I|A|38||||2_565
7CHD|1|I|C|39||||2_565

Current chains

Chain I

RNA (77-MER)

Nearby chains