7CHD Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7CHD_001 | 1/I/13:22 | No text annotation | homologous HL_4LCK_001 NA | |
| HL_7CHD_002 | 1/I/31:39 | tRNA anticodon loop | homologous HL_5UD5_002 HL_68642.1 | |
| HL_7CHD_003 | 1/I/53:61 | T-loop with 2 stacked bulged bases | homologous HL_7VNV_003 HL_33597.1 | |
| HL_7CHD_004 | 1/J/13:22 | No text annotation | homologous HL_4LCK_001 NA | |
| HL_7CHD_005 | 1/J/31:39 | tRNA anticodon loop | homologous HL_5UD5_002 HL_68642.1 | |
| HL_7CHD_006 | 1/J/53:61 | T-loop with 2 stacked bulged bases | homologous HL_7VNV_003 HL_33597.1 | |
| HL_7CHD_007 | 1/I/13:22 | tRNA D-loop | geometric HL_4V9Q_213 HL_63054.1 | |
| HL_7CHD_008 | 1/I/31:39 | tRNA anticodon loop | geometric HL_5L4O_002 NA | |
| HL_7CHD_009 | 1/I/53:61 | T-loop with 2 stacked bulged bases | geometric HL_2FMT_006 NA | |
| HL_7CHD_010 | 1/J/13:22 | tRNA D-loop | geometric HL_4V9Q_213 HL_63054.1 | |
| HL_7CHD_011 | 1/J/31:39 | tRNA anticodon loop | geometric HL_5L4O_002 NA | |
| HL_7CHD_012 | 1/J/53:61 | T-loop with 2 stacked bulged bases | geometric HL_2FMT_006 NA |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_7CHD_001 | 1/I/7:10, 1/I/25:27, 1/I/43:49, 1/I/65:66 | tRNA junction | homologous J4_7VNV_001 J4_58311.1 | |
| J4_7CHD_002 | 1/J/7:10, 1/J/25:27, 1/J/43:49, 1/J/65:66 | tRNA junction | homologous J4_7VNV_001 J4_58311.1 | |
| J4_7CHD_003 | 1/I/7:10, 1/I/25:27, 1/I/43:49, 1/I/65:66 | No text annotation | ||
| J4_7CHD_004 | 1/J/7:10, 1/J/25:27, 1/J/43:49, 1/J/65:66 | No text annotation |
Problematic loops
No problematic loops
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