HL_7D80_045
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GUUUAUUAAAAAC
- Length
- 13 nucleotides
- Bulged bases
- 7D80|1|A|A|1780, 7D80|1|A|U|1781, 7D80|1|A|U|1782, 7D80|1|A|A|1786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D80_045 not in the Motif Atlas
- Homologous match to HL_7A0S_045
- Geometric discrepancy: 0.2234
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_60266.1
- Basepair signature
- cWW-cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7D80|1|A|G|1776
7D80|1|A|U|1777
7D80|1|A|U|1778
7D80|1|A|U|1779
7D80|1|A|A|1780
7D80|1|A|U|1781
7D80|1|A|U|1782
7D80|1|A|A|1783
7D80|1|A|A|1784
7D80|1|A|A|1785
7D80|1|A|A|1786
7D80|1|A|A|1787
7D80|1|A|C|1788
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain b
- 50S ribosomal protein L2
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