HL_7D80_090
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CGAUGCAACGCG
- Length
- 12 nucleotides
- Bulged bases
- 7D80|1|B|G|971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D80_090 not in the Motif Atlas
- Geometric match to HL_2Y9H_005
- Geometric discrepancy: 0.3313
- The information below is about HL_2Y9H_005
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86870.1
- Basepair signature
- cWW-cWW-F
- Number of instances in this motif group
- 3
Unit IDs
7D80|1|B|C|962
7D80|1|B|G|963
7D80|1|B|A|964
7D80|1|B|U|965
7D80|1|B|G|966
7D80|1|B|C|967
7D80|1|B|A|968
7D80|1|B|A|969
7D80|1|B|C|970
7D80|1|B|G|971
7D80|1|B|C|972
7D80|1|B|G|973
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain J
- 30S ribosomal protein S9
- Chain K
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S13
- Chain O
- 30S ribosomal protein S14
- Chain y
- Transfer RNA; tRNA
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