HL_7D80_126
3D structure
- PDB id
- 7D80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase, trigger factor, and methionine aminopeptidase
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UCGCGAGA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7D80_126 not in the Motif Atlas
- Geometric match to HL_2IL9_007
- Geometric discrepancy: 0.3099
- The information below is about HL_2IL9_007
- Detailed Annotation
- GNRA with near cWW
- Broad Annotation
- GNRA with near cWW
- Motif group
- HL_82182.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
7D80|1|B|U|1264
7D80|1|B|C|1265
7D80|1|B|G|1266
7D80|1|B|C|1267
7D80|1|B|G|1268
7D80|1|B|A|1269
7D80|1|B|G|1270
7D80|1|B|A|1271
Current chains
- Chain B
- 16S ribosomal RNA
Nearby chains
- Chain O
- 30S ribosomal protein S14
- Chain T
- 30S ribosomal protein S19
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