HL_7F0D_008

3D structure

PDB id

7F0D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGGUAGGG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7F0D_008 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3233

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7F0D|1|A|C|292
7F0D|1|A|G|293
7F0D|1|A|G|294
7F0D|1|A|G|295
7F0D|1|A|U|296
7F0D|1|A|A|297
7F0D|1|A|G|298
7F0D|1|A|G|299
7F0D|1|A|G|300

Current chains

Chain A

23S rRNA

Nearby chains