HL_7F0D_069
3D structure
- PDB id
- 7F0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Mycobacterium tuberculosis 50S ribosome subunit bound with clarithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 7F0D|1|A|G|2989, 7F0D|1|A|C|2993
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7F0D_069 not in the Motif Atlas
- Geometric match to HL_4V9F_068
- Geometric discrepancy: 0.1521
- The information below is about HL_4V9F_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.1
- Basepair signature
- cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
7F0D|1|A|C|2983
7F0D|1|A|U|2984
7F0D|1|A|G|2985
7F0D|1|A|A|2986
7F0D|1|A|A|2987
7F0D|1|A|A|2988
7F0D|1|A|G|2989
7F0D|1|A|C|2990
7F0D|1|A|A|2991
7F0D|1|A|U|2992
7F0D|1|A|C|2993
7F0D|1|A|U|2994
7F0D|1|A|A|2995
7F0D|1|A|A|2996
7F0D|1|A|G|2997
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain J
- 50S ribosomal protein L13
Coloring options: