HL_7F5S_088
3D structure
- PDB id
- 7F5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- human delta-METTL18 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- (PSU)UUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7F5S|1|L5|A|3642, 7F5S|1|L5|A|3643, 7F5S|1|L5|U|3644, 7F5S|1|L5|A|3648
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7F5S_088 not in the Motif Atlas
- Homologous match to HL_8C3A_046
- Geometric discrepancy: 0.2101
- The information below is about HL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7F5S|1|L5|PSU|3639
7F5S|1|L5|U|3640
7F5S|1|L5|U|3641
7F5S|1|L5|A|3642
7F5S|1|L5|A|3643
7F5S|1|L5|U|3644
7F5S|1|L5|U|3645
7F5S|1|L5|A|3646
7F5S|1|L5|A|3647
7F5S|1|L5|A|3648
7F5S|1|L5|A|3649
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LA
- 60S ribosomal protein L8
- Chain Lj
- 60S ribosomal protein L37
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