3D structure

PDB id
8C3A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of ailanthone bound to the Candida albicans 80S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UCUAAUUAAAA
Length
11 nucleotides
Bulged bases
8C3A|1|1|A|2116, 8C3A|1|1|A|2117, 8C3A|1|1|U|2118, 8C3A|1|1|A|2122
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_43613.6
Basepair signature
cWW-tWH-tWH-F
Number of instances in this motif group
6

Unit IDs

8C3A|1|1|U|2113
8C3A|1|1|C|2114
8C3A|1|1|U|2115
8C3A|1|1|A|2116
8C3A|1|1|A|2117
8C3A|1|1|U|2118
8C3A|1|1|U|2119
8C3A|1|1|A|2120
8C3A|1|1|A|2121
8C3A|1|1|A|2122
8C3A|1|1|A|2123

Current chains

Chain 1
25S

Nearby chains

Chain AK
60S ribosomal protein L37-B
Chain j
60S ribosomal protein L2-B

Coloring options:

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