HL_7JQB_007

3D structure

PDB id

7JQB (explore in PDB, NAKB, or RNA 3D Hub)

Description

SARS-CoV-2 Nsp1 and rabbit 40S ribosome complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUCGCCGUGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7JQB|1|A|G|377
7JQB|1|A|U|378
7JQB|1|A|C|379
7JQB|1|A|G|380
7JQB|1|A|C|381
7JQB|1|A|C|382
7JQB|1|A|G|383
7JQB|1|A|U|384
7JQB|1|A|G|385
7JQB|1|A|C|386
7JQB|1|A|C|387

Current chains

Chain A

rRNA

Nearby chains

Chain J

eS8

Chain O

uS17