HL_7JSW_028
3D structure
- PDB id
- 7JSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GCGUAAUAGC
- Length
- 10 nucleotides
- Bulged bases
- 7JSW|1|1|A|1095
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSW_028 not in the Motif Atlas
- Homologous match to HL_5J7L_212
- Geometric discrepancy: 0.47
- The information below is about HL_5J7L_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7JSW|1|1|G|1091
7JSW|1|1|C|1092
7JSW|1|1|G|1093
7JSW|1|1|U|1094
7JSW|1|1|A|1095
7JSW|1|1|A|1096
7JSW|1|1|U|1097
7JSW|1|1|A|1098
7JSW|1|1|G|1099
7JSW|1|1|C|1100
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain F
- 50S ribosomal protein L36
- Chain f
- 50S ribosomal protein L6
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