HL_7JSW_096
3D structure
- PDB id
- 7JSW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- GUGAUAAAC
- Length
- 9 nucleotides
- Bulged bases
- 7JSW|1|3|U|1168
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSW_096 not in the Motif Atlas
- Geometric match to HL_5UD5_002
- Geometric discrepancy: 0.3415
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_87306.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
7JSW|1|3|G|1164
7JSW|1|3|U|1165
7JSW|1|3|G|1166
7JSW|1|3|A|1167
7JSW|1|3|U|1168
7JSW|1|3|A|1169
7JSW|1|3|A|1170
7JSW|1|3|A|1171
7JSW|1|3|C|1172
Current chains
- Chain 3
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S2
- Chain Z
- 30S ribosomal protein S21
Coloring options: