HL_7JSZ_005
3D structure
- PDB id
- 7JSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ArfB Rescue of a 70S Ribosome stalled on truncated mRNA with a partial A-site codon (+2-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- UGAAUCCAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JSZ_005 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.272
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7JSZ|1|1|U|158
7JSZ|1|1|G|159
7JSZ|1|1|A|160
7JSZ|1|1|A|161
7JSZ|1|1|U|162
7JSZ|1|1|C|163
7JSZ|1|1|C|164
7JSZ|1|1|A|165
7JSZ|1|1|U|166
7JSZ|1|1|A|167
7JSZ|1|1|G|168
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain x
- 50S ribosomal protein L28
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