HL_7JT3_037

3D structure

PDB id

7JT3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7JT3|1|1|A|1535, 7JT3|1|1|C|1536

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7JT3_037 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.2553

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7JT3|1|1|C|1533
7JT3|1|1|U|1534
7JT3|1|1|A|1535
7JT3|1|1|C|1536
7JT3|1|1|G|1537
7JT3|1|1|G|1538

Current chains

Chain 1

23S ribosomal RNA

Nearby chains