HL_7JT3_102
3D structure
- PDB id
- 7JT3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rotated 70S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound in the A site (+9-IV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 7JT3|1|5|C|17, 7JT3|1|5|U|17|||A, 7JT3|1|5|G|18, 7JT3|1|5|G|19, 7JT3|1|5|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7JT3_102 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.2042
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7JT3|1|5|C|13
7JT3|1|5|A|14
7JT3|1|5|G|15
7JT3|1|5|C|16
7JT3|1|5|C|17
7JT3|1|5|U|17|||A
7JT3|1|5|G|18
7JT3|1|5|G|19
7JT3|1|5|U|20
7JT3|1|5|A|21
7JT3|1|5|G|22
Current chains
- Chain 5
- tRNAfMet
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain a
- 50S ribosomal protein L1
Coloring options: