HL_7K50_006

3D structure

PDB id

7K50 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation non-frameshifting(CCA-A) complex (Structure I)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7K50|1|1|A|196

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7K50_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.1451

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.4

Basepair signature

cWW-tSH-F

Number of instances in this motif group

15

Unit IDs

7K50|1|1|G|194
7K50|1|1|A|195
7K50|1|1|A|196
7K50|1|1|A|197
7K50|1|1|C|198
7K50|1|1|A|199
7K50|1|1|U|200
7K50|1|1|C|201

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain l

50S ribosomal protein L15

Chain x

50S ribosomal protein L28